So are only some of the eggs collapsed looking??, & the others OK?
If so, u could keep them a bit more seperated from the others for a few days - they'll shrivel in that time, & unless u have too much moisture/humidity, shouldn't go mouldy, just dry & shrivel up.
Like Wranga said, I can't imagine them being much good either though, so best to get rid of the ones that don't look good.
Feed her up well, supplement feeders with calcium, & hopefully the problem shouldn't happen with her next clutch.